PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_019969
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family WRKY
Protein Properties Length: 148aa    MW: 16480.5 Da    PI: 5.6619
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_019969genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.86.6e-11123145123
                  ---SS-EEEEEEE--TT-SS-EE CS
         WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                  ldDgy+WrKYG+K+vk++++pr+
  DCAR_019969 123 LDDGYKWRKYGKKMVKSNPNPRQ 145
                  59*******************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-10110145IPR003657WRKY domain
SuperFamilySSF1182909.02E-9116144IPR003657WRKY domain
PROSITE profilePS5081113.574118147IPR003657WRKY domain
PfamPF031068.1E-7124145IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MSMSTLLVPL IQTPGSNPNP SMINSCVNDN RDDLGFDFSD YLALEDDYSC NLSSFLSDSA  60
PVILQDNLQT SAESSMNSNP DDVDNSHDHH LLQIKKCSKR MKCTGGDKGS RIAFRMKTEL  120
EVLDDGYKWR KYGKKMVKSN PNPRQVL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21242462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.19e-15WRKY DNA-binding protein 50